Abstract:
Molecular orbital
calculations were done using quantum mechanical predictions done
by computer software. wxMacMolPlt was used to create the input
files for the calculations.3 The calculations
themselves were done using Gamess.4 The JMOL
software was used to analyze the data.5 Geometry
optimizations and energy calculations were done on three different
molecules, and the results were compared between several sized
basis sets.
Introduction:
Looking at the
"electronic structure of a molecule" shows much about how it
reacts.8 The electronic structure of molecules
can be useful in finding out where the electrons might be, and can
help in predicting properties like the dipole moment, vibrational
frequency, and if the molecule will donate its electrons.8
Originally, quantum calculations were done by scientists slaving
away on paper, but with computers, computations of geometry and
energy predictions become much easier.8 Even with the
large cost of hardware, the advantage of being able to calculate
such large “basis set” wavefunctions overpowers the costs. When
doing these calcluations, a larger basis set helps create a more
accurate prediction of energy and molecular geometries. To do
these geometry optimizations, the computer tries to find an
“arrangement of atoms” that minimizes the energy of the system.8
The basis sets used in this experiment, in order of increasing
size were, 6-21G, 6-31G, and DZV (double zeta valence).8
DFT, or density functional calculations, were used for the larger
molecules because it is more efficient when it comes to the
increased number of electrons.8 The molecules tested
were dichlorine, hydrogen cyanide, and fluorobenzene. Each
molecule's geometry optimization was found at each basis set and
the molecules were then further examined with other
calcluations.
Clicking on the names below the
pictures of each molecule will take you to pages with further
details on that molecule.
Dichlorine
Hydrogen
Cyanide
Fluorobenzene
Conclusion:
Quantum
Calculations with computers can be useful when the materials for
testing the compounds, or the molecules themselves cost a lot of
money or produce a lot of waste. It is less costly, and more
environmentally friendly to make predictions.The experiments can
be complicated as well as costly, and doing calculations with
computer programs just may actually be the easier route. The
computational calculations can be done on molecules that do not
necessarily exist in the natural world as well. This can
allow chemists to explore new chemical theories or simply learn
more about existing theories.